bed

package

v0.1.2 Latest Latest Go to latest Published: Sep 9, 2021 License: MIT Imports: 3 Imported by: 0

Details

Valid go.mod file
Redistributable license
Tagged version
Stable version
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Repository

github.com/fluhus/biostuff

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Documentation ¶

Overview ¶

Package bed handles BED I/O.

This package uses the format described in: https://en.wikipedia.org/wiki/BED_(file_format)

Constants ¶

View Source

const (
	PlusStrand  = "+"
	MinusStrand = "-"
	NoStrand    = "."
)

Variables ¶

This section is empty.

Functions ¶

This section is empty.

Types ¶

type BED ¶ added in v0.1.2

type BED struct {
	Chrom       string
	ChromStart  int
	ChromEnd    int
	Name        string
	Score       int
	Strand      string
	ThickStart  int
	ThickEnd    int
	ItemRGB     [3]byte
	BlockCount  int
	BlockSizes  []int
	BlockStarts []int
}

Source Files ¶

View all Source files

bed.go

Directories ¶

Path	Synopsis
bedgraph Handles bed-graph file representation and parsing.	Handles bed-graph file representation and parsing.

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